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Samantha Stewart

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Articles

Recent activity by Samantha Stewart

  • Getting Started with Genomic Analyses on the Researcher Workbench

    Efficient genomic analysis requires strategic planning and adherence to best practices, especially when dealing with large datasets and complex computational tools like Hail. This article outlines ...

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    • 4 votes
  • All of Us Genomic Quality Report (Archived C2022Q4R13 CDRv7)

    This document details the All of Us Genome Centers (GC) and Data and Research Center (DRC) quality control (QC) steps for genomic data in the research pipeline. This pipeline removes or flags sampl...

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    • 2 votes
  • Using the Temporal Feature within the Cohort Builder

    Note: We recommend reading “Selecting participants using the Cohort Builder” before reading the following article as a basic understanding of the Cohort Builder is helpful to using the temporal f...

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    • 2 votes
  • Catalog of Events for Researchers

    We host several live, virtual events for researchers using the All of Us Researcher Workbench. Events support researchers with different technical and support needs, ranging from introductory to ad...

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    • 6 votes
  • Benchmarking and quality analyses on the All of Us short-read structural variant catalog

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  • October 2024 Product Release Notes

    The following release notes cover the most recent changes over the last two months. If you have any questions, email the All of Us Researcher Workbench support team at support@researchallofus.org. ...

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    • 0 votes
  • Troubleshooting Identity Verification Issues

    Here are a few recommendations to navigate common issues with identity verification in the Researcher Workbench. I have successfully completed identity verification, but why is it not syncing in t...

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    • -4 votes
  • Data Explorer in Researcher Workbench

    In the Researcher Workbench cohorts and datasets can be created through the Data Explorer, powered by Verily Pre. Data Explorer lets you visually explore data, design custom cohorts, and export dat...

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  • All of Us Data and Research Center Policy on Sensitive U.S. Data Protection

    Updated April 9th, 2025 Background On January 8, 2025, the U.S. Department of Justice issued a new rule prohibiting access to certain sensitive personal data and biospecimens of U.S. persons and U....

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    • 4 votes
  • August 2024 Product Release Notes

    The following release notes cover the most recent changes over the last two months. If you have any questions, email the All of Us Researcher Workbench support team at support@researchallofus.org. ...

    • Updated
    • 1 follower
    • 0 comments
    • 0 votes