Samantha Stewart
Articles
Recent activity by Samantha Stewart
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Introduction to All of Us Physical Measurement Data Collection and Transformation Methods
Within the All of Us Research Program, physical measurements are obtained from participants in an in-person clinical visit, through online self-reported questionnaires, and via EHR extraction. Meas...
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- 1 follower
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- 4 votes
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Benchmarking and quality analyses on the All of Us Short-Read Structural Variant Catalog (v7)(ARCHIVED)
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- 1 follower
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Overview of the All by All tables available on the All of Us Researcher Workbench
The All by All tables were created by leveraging the extensive genomic and phenotypic data available through the All of Us Researcher Workbench.Using the available short-read whole genome sequence ...
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- 2 followers
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- 10 votes
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Exploring All of Us data using SAS Studio
SAS, which stands for "Statistical Analysis Software," is a statistical software tool used for data analysis and statistical modeling. It has the ability to handle large datasets efficiently with ...
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How to run SAS in the Researcher Workbench
SAS Studio is available as an integrated application on the All of Us Researcher Workbench. The SAS Studio application in the Researcher Workbench connects to a SAS server in order to process SAS c...
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Introduction to Wearables Data Collection and Transformation
Participants can consent to share their wearables data with the All of Us Research Program. Wearables data is shared via two sources - Fitbit and Apple Healthkit. These data are available in both t...
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- 5 followers
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- 11 votes
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Researcher Workbench Getting Started Guide
The following getting started guide includes information for accessing and exploring Researcher Workbench. For a video overview, see this Office Hours Session.For a PDF copy of this guide, see here...
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- 7 followers
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- 7 votes
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Getting Started with Genomic Analyses on the Researcher Workbench
Efficient genomic analysis requires strategic planning and adherence to best practices, especially when dealing with large datasets and complex computational tools like Hail. This article outlines ...
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All of Us Genomic Quality Report (ARCHIVED C2022Q4R13 CDRv7)
This document details the All of Us Genome Centers (GC) and Data and Research Center (DRC) quality control (QC) steps for genomic data in the research pipeline. This pipeline removes or flags sampl...
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Catalog of Events for Researchers
We host several live, virtual events for researchers using the All of Us Researcher Workbench. Events support researchers with different technical and support needs, ranging from introductory to ad...
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- 4 followers
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- 5 votes